1. EDscan: A program for discovering well-ordered folding segments in nucleotide sequences.
Execute EDscan
2. SigStb and SegFold: The programs for discovering unusual folding regions (UFRs) in RNAs.
3. EFFold: A program for predicting a set of RNA secondary structures that are near optimal, and simultaneously to compile all possible stems that are thermodynamically favorable in RNA foldings.
Execute EFFold
4. A program for predicting a secondary structure common to a number of phylogenetically related sequences without the need for pre-aligned RNA sequences.
Execute RNAGA
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